STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fhuA3Outer membrane receptor proteins mostly Fe transport (713 aa)    
Predicted Functional Partners:
XCC2385
Outer membrane receptor proteins mostly Fe transport
  
  
 0.517
XCC1990
Outer membrane receptor proteins mostly Fe transport
  
  
 0.486
XCC1390
annotation not available
       0.455
XCC0050
Outer membrane receptor proteins, mostly Fe transport
  
  
 0.431
fecR
Fe2+-dicitrate sensor, membrane component
 
  
 0.429
XCC4214
annotation not available
  
     0.420
XCC3209
Outer membrane receptor proteins mostly Fe transport
   
  
 0.417
XCC0428
annotation not available
  
     0.410
fpvA1
Outer membrane receptor for monomeric catechols
  
  
0.404
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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