STRINGSTRING
fasD protein (Xanthomonas campestris campestris) - STRING interaction network
"fasD" - Outer membrane usher protein FasD in Xanthomonas campestris campestris
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fasDOuter membrane usher protein FasD; P pilus assembly protein porin PapC (811 aa)    
Predicted Functional Partners:
ecpD
P pilus assembly protein chaperone PapD (251 aa)
 
 
  0.990
XCC1378
annotation not available (351 aa)
 
     
  0.978
pru
annotation not available (196 aa)
 
     
  0.977
XCC1376
P pilus assembly protein, chaperone PapD (238 aa)
 
 
  0.968
yapH
annotation not available (3961 aa)
 
     
  0.756
XCC1377
annotation not available (106 aa)
              0.636
map
Methionine aminopeptidase; Unnamed protein product (307 aa)
              0.603
glnD
Bifunctional uridylyltransferase/uridylyl-removing enzyme; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen assimilation and met [...] (869 aa)
              0.603
xpsH
Type II secretion system protein H; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins (169 aa)
           
  0.587
dapD
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Unnamed protein product; Belongs to the transferase hexapeptide repeat family (390 aa)
              0.568
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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