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phaZ protein (Xanthomonas campestris campestris) - STRING interaction network
"phaZ" - PHB depolymerase in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phaZPHB depolymerase; Poly-beta-hydroxyalkanoate depolymerase (435 aa)    
Predicted Functional Partners:
phbC
Poly (3-hydroxybutyric acid) synthase; Unnamed protein product (358 aa)
 
   
  0.956
XCC2295
Uncharacterized protein conserved in bacteria (210 aa)
 
     
  0.707
XCC1354
annotation not available (215 aa)
 
          0.669
XCC1355
Predicted membrane protein (150 aa)
 
          0.502
phbB
Acetoacetyl-coA reductase; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) (246 aa)
   
     
  0.436
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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