STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC1352Predicted membrane protein (303 aa)    
Predicted Functional Partners:
XCC1351
Uncharacterized protein; Predicted transcriptional regulators
 
     0.952
XCC1496
annotation not available
  
     0.639
XCC3189
Uncharacterized protein
  
     0.592
XCC3871
Mn2+-dependent serine/threonine protein kinase
  
     0.571
gumN
Uncharacterized protein conserved in bacteria
  
     0.562
XCC0025
Uncharacterized protein; Putative peptidase
  
     0.554
XCC0023
Uncharacterized protein
 
     0.539
phy
Uncharacterized protein; 3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase)
  
     0.528
dauE
Aklaviketone reductase; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
  
     0.492
XCC2631
annotation not available
  
     0.491
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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