STRINGSTRING
XCC1350 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC1350" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC1350annotation not available (505 aa)    
Predicted Functional Partners:
oprN3
Outer membrane component of multidrug efflux pump; Outer membrane protein (467 aa)
   
          0.664
CAP52012.1
Integrase (466 aa)
   
          0.584
CAP52479.1
Site-specific recombinase XerD (464 aa)
   
          0.579
XCC1613
Integrase; Belongs to the ’phage’ integrase family (482 aa)
   
          0.578
fepA
TonB-dependent receptor; Predicted hydrolase (HAD superfamily) (763 aa)
   
          0.547
XCC0456
Opacity protein and related surface antigens (279 aa)
   
          0.541
XCC3590
annotation not available (818 aa)
   
          0.525
yapH
annotation not available (3961 aa)
   
          0.503
XCC3075
annotation not available (388 aa)
   
          0.499
XCC3444
annotation not available (381 aa)
   
          0.498
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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