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XCC1334 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC1334" - DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog in Xanthomonas campestris campestris
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC1334DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily (187 aa)    
Predicted Functional Partners:
XCC1333
Uncharacterized protein conserved in bacteria (279 aa)
 
 
 
  0.983
XCC1335
annotation not available (157 aa)
              0.772
XCC3663
Secreted and surface protein containing fasciclin-like repeats (185 aa)
 
     
  0.677
XCC1268
annotation not available (286 aa)
   
 
  0.667
XCC1330
annotation not available (317 aa)
 
     
  0.655
XCC1336
annotation not available (262 aa)
              0.655
XCC1331
Dehydrogenase; Predicted NAD/FAD-binding protein (416 aa)
 
     
  0.645
rpoH
DNA-directed RNA polymerase sigma subunit (sigma70/sigma32) (291 aa)
   
 
  0.644
cfa1
Cyclopropane fatty acid synthase and related methyltransferases (431 aa)
 
     
  0.608
rpoC
DNA-directed RNA polymerase subunit beta’; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1405 aa)
     
 
  0.606
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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