STRINGSTRING
XCC1331 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC1331" - Dehydrogenase in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC1331Dehydrogenase; Predicted NAD/FAD-binding protein (416 aa)    
Predicted Functional Partners:
cfa1
Cyclopropane fatty acid synthase and related methyltransferases (431 aa)
   
  0.994
XCC1330
annotation not available (317 aa)
   
  0.994
XCC1327
Predicted membrane protein (260 aa)
 
        0.974
cfa2
Uncharacterized protein; Cyclopropane fatty acid synthase and related methyltransferases (356 aa)
   
  0.967
XCC1328
annotation not available (181 aa)
 
          0.937
desC
Inserts a double bond at the delta position of fatty acids (333 aa)
 
        0.934
cox11
Cytochrome oxidase assembly factor (198 aa)
 
            0.753
phr
Photolyase-like protein; Deoxyribodipyrimidine photolyase; Belongs to the DNA photolyase family (520 aa)
 
     
  0.701
XCC1336
annotation not available (262 aa)
 
          0.687
XCC1333
Uncharacterized protein conserved in bacteria (279 aa)
 
     
  0.664
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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