STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC1330annotation not available (317 aa)    
Predicted Functional Partners:
XCC1331
Dehydrogenase; Predicted NAD/FAD-binding protein
  
 0.994
cfa1
Cyclopropane fatty acid synthase and related methyltransferases
  
 0.993
XCC1327
Predicted membrane protein
 
    0.972
cfa2
Uncharacterized protein; Cyclopropane fatty acid synthase and related methyltransferases
  
 0.965
XCC1328
annotation not available
 
     0.955
desC
Inserts a double bond at the delta position of fatty acids
 
    0.934
XCC1336
annotation not available
 
     0.766
XCC1334
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily
 
   
 0.655
phr
Photolyase-like protein; Deoxyribodipyrimidine photolyase; Belongs to the DNA photolyase family
 
   
 0.643
XCC1282
Uncharacterized protein; Deoxyribodipyrimidine photolyase
 
   
 0.636
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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