STRINGSTRING
cfa2 protein (Xanthomonas campestris campestris) - STRING interaction network
"cfa2" - Uncharacterized protein in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cfa2Uncharacterized protein; Cyclopropane fatty acid synthase and related methyltransferases (356 aa)    
Predicted Functional Partners:
XCC1327
Predicted membrane protein (260 aa)
        0.971
XCC1331
Dehydrogenase; Predicted NAD/FAD-binding protein (416 aa)
   
  0.967
XCC1330
annotation not available (317 aa)
   
  0.965
desC
Inserts a double bond at the delta position of fatty acids (333 aa)
 
        0.925
XCC1328
annotation not available (181 aa)
 
          0.916
cfa1
Cyclopropane fatty acid synthase and related methyltransferases (431 aa)
 
     
0.914
XCC4123
Outer membrane lipoprotein; Bacterial lipocalin (182 aa)
 
        0.688
XCC1336
annotation not available (262 aa)
 
          0.650
XCC0780
Two-component system sensor protein; Signal transduction histidine kinase (423 aa)
 
        0.577
XCC3508
Outer membrane lipoprotein; Bacterial lipocalin (258 aa)
 
        0.559
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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