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XCC1323 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC1323" - Putative membrane protein in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC1323Putative membrane protein (907 aa)    
Predicted Functional Partners:
XCC1322
Virulence protein; Type IV secretory pathway, VirJ component (457 aa)
 
   
  0.850
XCC2304
Virulence protein; Type IV secretory pathway VirJ component (415 aa)
 
   
  0.828
mdoB
Phosphoglycerol transferase I; Transfers a phosphoglycerol residue from phosphatidylglycerol to the membrane-bound nascent glucan backbones; Belongs to the OpgB family (702 aa)
         
  0.656
msrA
Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine (216 aa)
         
  0.631
lysU
Lysine--tRNA ligase; Lysyl-tRNA synthetase class II; Belongs to the class-II aminoacyl-tRNA synthetase family (505 aa)
       
  0.631
cls5
Cardiolipin synthase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol (474 aa)
 
   
  0.625
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1387 aa)
     
   
  0.611
rpoC
DNA-directed RNA polymerase subunit beta’; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1405 aa)
     
   
  0.611
cdsA1
Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase (324 aa)
     
   
  0.611
entF
ATP-dependent serine activating enzyme; Non-ribosomal peptide synthetase modules and related proteins (1326 aa)
           
  0.605
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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