STRINGSTRING
XCC1322 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC1322" - Virulence protein in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC1322Virulence protein; Type IV secretory pathway, VirJ component (457 aa)    
Predicted Functional Partners:
XCC1323
Putative membrane protein (907 aa)
 
   
  0.850
XCC1321
Uncharacterized protein; Unknown function (60 aa)
              0.633
XCC1319
RNA 2’,3’-cyclic phosphodiesterase; Hydrolyzes RNA 2’,3’-cyclic phosphodiester to an RNA 2’- phosphomonoester (200 aa)
 
          0.536
XCC1973
annotation not available (697 aa)
   
          0.511
XCC3753
Tfp pilus assembly protein major pilin PilA (246 aa)
           
  0.489
XCC2621
annotation not available (208 aa)
   
          0.427
XCC2649
annotation not available (181 aa)
   
          0.425
XCC3148
Lipase/esterase; Phospholipase/lecithinase/hemolysin (605 aa)
   
     
  0.424
pefL
Type II secretion system protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins (373 aa)
   
     
  0.422
XCC1390
annotation not available (349 aa)
   
          0.415
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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