STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC1298Subtilisin-like serine proteases (953 aa)    
Predicted Functional Partners:
XCC4239
Polysaccharide deacetylase; Uncharacterized protein containing caspase domain
 
 
 0.655
XCC2506
Uncharacterized protein conserved in bacteria
  
     0.654
XCC1496
annotation not available
  
     0.599
fadA3
Acetoacetyl-CoA thiolase; Acetyl-CoA acetyltransferase; Belongs to the thiolase family
       0.567
XCC3148
Lipase/esterase; Phospholipase/lecithinase/hemolysin
  
   
 0.562
yapH
annotation not available
 
   
0.560
XCC2944
Outer membrane receptor proteins
 
   
 0.546
mopB
Outer membrane protein and related peptidoglycan-associated (lipo)proteins; Belongs to the ompA family
 
  
 0.521
virK
annotation not available
  
     0.507
XCC4132
OmpA-related protein; Outer membrane receptor for ferrienterochelin and colicins
  
   
 0.499
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
Server load: low (8%) [HD]