STRINGSTRING
XCC1298 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC1298" - Subtilisin-like serine proteases in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC1298Subtilisin-like serine proteases (953 aa)    
Predicted Functional Partners:
XCC4239
Polysaccharide deacetylase; Uncharacterized protein containing caspase domain (919 aa)
 
 
  0.655
XCC2506
Uncharacterized protein conserved in bacteria (375 aa)
   
          0.654
XCC1496
annotation not available (177 aa)
   
          0.599
fadA3
Acetoacetyl-CoA thiolase; Acetyl-CoA acetyltransferase; Belongs to the thiolase family (391 aa)
              0.567
XCC3148
Lipase/esterase; Phospholipase/lecithinase/hemolysin (605 aa)
   
     
  0.562
yapH
annotation not available (3961 aa)
 
     
0.560
XCC2944
Outer membrane receptor proteins (878 aa)
 
     
  0.546
mopB
Outer membrane protein and related peptidoglycan-associated (lipo)proteins; Belongs to the ompA family (365 aa)
 
   
  0.521
virK
annotation not available (143 aa)
   
          0.507
XCC4132
OmpA-related protein; Outer membrane receptor for ferrienterochelin and colicins (1010 aa)
   
     
  0.499
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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