STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC1287Oxidoreductase; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases (423 aa)    
Predicted Functional Partners:
XCC3085
Uncharacterized protein conserved in bacteria
 
 
    0.674
bgl5
Beta-glucosidase-related glycosidases
   
  
 0.588
cspA2
Cold shock proteins
       0.582
XCC2631
annotation not available
  
     0.547
CAP51728.1
Integrase
      
 0.487
fixL
Sensor histidine kinase; Membrane transporters of cations and cationic drugs
      
 0.482
hisC3
Aminotransferase; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
      
 0.470
XCC1320
Uncharacterized protein conserved in bacteria
  
     0.450
XCC1285
Probable S-methyl-5'-thioinosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioinosine (MTI) to hypoxanthine and 5-methylthioribose-1- phosphate. Involved in the breakdown of S-methyl-5'-thioadenosine (MTA), a major by-product of polyamine biosynthesis. Catabolism of (MTA) occurs via deamination to MTI and phosphorolysis to hypoxanthine
       0.426
XCC0755
Transcriptional regulator
  
 
   0.403
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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