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cspA2 protein (Xanthomonas campestris campestris) - STRING interaction network
"cspA2" - Cold shock proteins in Xanthomonas campestris campestris
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cspA2Cold shock proteins (68 aa)    
Predicted Functional Partners:
XCC1285
Probable S-methyl-5’-thioinosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5’- thioinosine (MTI) to hypoxanthine and 5-methylthioribose-1- phosphate. Involved in the breakdown of S-methyl-5’-thioadenosine (MTA), a major by-product of polyamine biosynthesis. Catabolism of (MTA) occurs via deamination to MTI and phosphorolysis to hypoxanthine (250 aa)
              0.607
pnp
Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3’- to 5’-direction (735 aa)
     
 
  0.592
XCC1287
Oxidoreductase; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases (423 aa)
              0.582
fliC
Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella (399 aa)
       
 
  0.570
csrA
Translational regulator CsrA; A key translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Mediates global changes in gene expression, shifting from rapid growth to stress survival by linking envelope stress, the stringent response and the catabolite repression systems. Usually binds in the 5’- UTR; binding at or near the Shine-Dalgarno sequence prevents ribosome-binding, repressing translation, binding elsewhere in the 5’-UTR can activate translation and/or stabilize the mRNA. Its function is antagonized by small RNA(s) (70 aa)
           
  0.534
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination (241 aa)
         
  0.521
hpt
Hypoxanthine-guanine phosphoribosyltransferase; Unnamed protein product (184 aa)
         
  0.509
purC
Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase; Belongs to the SAICAR synthetase family (310 aa)
     
   
  0.507
XCC0192
Lactoylglutathione lyase and related lyases (131 aa)
           
  0.489
XCC4109
Bleomycin resistance protein; Lactoylglutathione lyase and related lyases (128 aa)
           
  0.485
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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