STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC1282Uncharacterized protein; Deoxyribodipyrimidine photolyase (531 aa)    
Predicted Functional Partners:
XCC4110
annotation not available
 
     0.799
XCC1281
Uncharacterized protein; Predicted NAD/FAD-dependent oxidoreductase
 
     0.757
phr
Photolyase-like protein; Deoxyribodipyrimidine photolyase; Belongs to the DNA photolyase family
 
   
 0.702
XCC1331
Dehydrogenase; Predicted NAD/FAD-binding protein
 
   
 0.642
XCC1330
annotation not available
 
   
 0.636
cfa1
Cyclopropane fatty acid synthase and related methyltransferases
 
   
 0.485
frnE
Polyketide synthase; Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis
       0.480
phS
Histidine kinase/response regulator hybrid protein; FOG: GAF domain
  
     0.475
XCC0169
annotation not available
 
     0.460
XCC3663
Secreted and surface protein containing fasciclin-like repeats
 
     0.414
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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