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mucD protein (Xanthomonas campestris campestris) - STRING interaction network
"mucD" - Trypsin-like serine proteases typically periplasmic contain C-terminal PDZ domain in Xanthomonas campestris campestris
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
mucDTrypsin-like serine proteases typically periplasmic contain C-terminal PDZ domain; Belongs to the peptidase S1C family (525 aa)    
Predicted Functional Partners:
XCC1267
DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily (206 aa)
   
   
  0.910
XCC1268
annotation not available (286 aa)
   
 
  0.817
rpoH
DNA-directed RNA polymerase sigma subunit (sigma70/sigma32) (291 aa)
   
 
  0.771
lepA
Elongation factor 4; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner (601 aa)
 
   
  0.741
rpoE5
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily (232 aa)
   
   
  0.714
manB
Phosphomannomutase (780 aa)
 
   
  0.684
mopB
Outer membrane protein and related peptidoglycan-associated (lipo)proteins; Belongs to the ompA family (365 aa)
     
 
  0.640
XCC3512
Two-component system regulatory protein; Response regulator of the LytR/AlgR family (248 aa)
           
  0.609
lepB
Signal peptidase I; Unnamed protein product; Belongs to the peptidase S26 family (266 aa)
   
   
  0.602
XCC3676
Transcriptional regulator protein; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain (258 aa)
           
  0.590
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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