STRINGSTRING
XCC1268 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC1268" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC1268annotation not available (286 aa)    
Predicted Functional Partners:
XCC1267
DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily (206 aa)
   
 
  0.967
mucD
Trypsin-like serine proteases typically periplasmic contain C-terminal PDZ domain; Belongs to the peptidase S1C family (525 aa)
   
 
  0.817
XCC1366
Zinc metalloprotease; Predicted membrane-associated Zn-dependent proteases 1 (448 aa)
     
 
  0.742
uptE
Outer membrane protein; RTX toxins and related Ca2+-binding proteins (296 aa)
   
          0.735
XCC3764
annotation not available (352 aa)
   
          0.733
XCC1144
annotation not available (168 aa)
   
          0.732
XCC2935
Uncharacterized protein; Type V secretory pathway, adhesin AidA (504 aa)
   
        0.730
XCC2931
annotation not available (174 aa)
   
          0.722
XCC0986
annotation not available (218 aa)
   
          0.717
XCC2644
Uncharacterized protein; DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) (224 aa)
 
 
  0.711
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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