STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mmsB3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases; Belongs to the 3-hydroxyisobutyrate dehydrogenase family (295 aa)    
Predicted Functional Partners:
mmsA
NAD-dependent aldehyde dehydrogenases
 
 0.998
ech2
Enoyl-CoA hydratase/carnithine racemase
  
 0.959
fadE4
Acyl-CoA dehydrogenases
 
  
 0.925
XCC1791
NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family
  
 0.918
ech3
Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family
 
  
 0.914
XCC2357
Omega-amino acid-pyruvate aminotransferase; Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
     
  0.900
fadB3
Enoyl-CoA hydratase/carnithine racemase; 3-hydroxyacyl-CoA dehydrogenase
  
 
 0.868
acsA
Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family
  
 
 0.838
prpC
Citrate synthase; Belongs to the citrate synthase family
  
 
 0.805
hisC3
Aminotransferase; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
     
 0.714
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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