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fadE4 protein (Xanthomonas campestris campestris) - STRING interaction network
"fadE4" - Acyl-CoA dehydrogenases in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fadE4Acyl-CoA dehydrogenases (393 aa)    
Predicted Functional Partners:
ech2
Enoyl-CoA hydratase/carnithine racemase (390 aa)
 
 
  0.979
ech3
Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family (265 aa)
 
 
  0.974
mmsB
3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases; Belongs to the 3-hydroxyisobutyrate dehydrogenase family (295 aa)
 
   
  0.925
mmsA
NAD-dependent aldehyde dehydrogenases (501 aa)
 
   
  0.894
etfA
Electron transfer flavoprotein, alpha subunit (314 aa)
 
  0.892
etfB
Electron transfer flavoprotein beta subunit; Unnamed protein product (248 aa)
 
 
  0.828
ech1
3-hydroxybutyryl-CoA dehydratase; Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family (260 aa)
 
 
  0.702
XCC1833
Enoyl-CoA hydratase/carnithine racemase (265 aa)
 
 
  0.694
XCC1146
Uncharacterized protein; Dihydroxynaphthoic acid synthase (228 aa)
 
 
  0.687
fadB3
Enoyl-CoA hydratase/carnithine racemase; 3-hydroxyacyl-CoA dehydrogenase (690 aa)
 
 
  0.681
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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