STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
galA2Arabinogalactan endo-1,4-beta-galactosidase (402 aa)    
Predicted Functional Partners:
bga3
Beta-galactosidase/beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family
   
 0.965
XCC1258
Outer membrane receptor proteins mostly Fe transport
 
   
 0.770
pel1
Pectate lyase
  
   
 0.712
wxcB
Putative protein kinase; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1, 4-benzoquinol methylase
      
 0.704
XCC1752
Cellulase; Uncharacterized protein related to plant photosystem II stability/assembly factor
  
     0.668
manA
Mannan endo-1,4-beta-mannosidase; Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family
  
     0.664
xylB5
Xylosidase; Hydrolyzes 1,4-beta-D-xylans to remove successive D-xylose residues from the non-reducing termini; Belongs to the glycosyl hydrolase 43 family
  
   
 0.609
wxcN
Predicted membrane protein
      
 0.604
wxcK
Aminotransferase; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; Belongs to the DegT/DnrJ/EryC1 family
      
 0.586
dgoK
2-keto-3-deoxy-galactonokinase
      
 0.582
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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