STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fucA2Uncharacterized protein; Alpha-L-fucosidase (642 aa)    
Predicted Functional Partners:
nanH
Uncharacterized protein; Predicted neuraminidase (sialidase)
  
 0.909
fucA1
Alpha-L-fucosidase
  
  
  0.909
XCC1756
Uncharacterized protein
 
  
  0.890
nahA
N-acetyl-beta-hexosaminidase
  
 0.753
XCC2893
Uncharacterized protein
 
   
 0.739
XCC2028
Uncharacterized protein; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
  
 0.673
XCC2894
Uncharacterized protein; Putative alpha-1,2-mannosidase
 
   
 0.669
XCC3162
Glycosyl hydrolase; Beta-galactosidase/beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family
 
  
 0.636
XCC3447
Uncharacterized protein; Metal-dependent hydrolase
  
     0.597
bga3
Beta-galactosidase/beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family
 
  
 0.595
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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