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hpa2 protein (Xanthomonas campestris campestris) - STRING interaction network
"hpa2" - Hpa2 protein in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hpa2Hpa2 protein; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) (190 aa)    
Predicted Functional Partners:
hpaB
HpaB protein; Pathogenicity-related export of effector proteins to host plants (160 aa)
   
     
  0.850
hrpB5
HrpB5 protein; Flagellar biosynthesis/type III secretory pathway protein (233 aa)
 
     
  0.835
hrcC
HrcC protein; Type III secretion system outer membrane protein (605 aa)
   
   
  0.809
hrpF
HrpF protein; Pathogenicity-related export of effector proteins to host plants (921 aa)
   
     
  0.796
hrpB1
annotation not available (151 aa)
   
     
  0.782
hrpD5
annotation not available (315 aa)
   
     
  0.780
hpaP
annotation not available (203 aa)
   
     
  0.755
hrcQ
HrcQ protein; Type III secretory pathway protein (335 aa)
 
   
  0.739
hrcT
HrpB8 protein; Type III secretory pathway component EscT (276 aa)
   
     
  0.712
hrcS
annotation not available (86 aa)
   
   
  0.664
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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