STRINGSTRING
hrcC protein (Xanthomonas campestris campestris) - STRING interaction network
"hrcC" - HrcC protein in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hrcCHrcC protein; Type III secretion system outer membrane protein (605 aa)    
Predicted Functional Partners:
hrcJ
Lipoprotein; Type III secretory pathway lipoprotein EscJ (254 aa)
 
 
  0.992
hrcT
HrpB8 protein; Type III secretory pathway component EscT (276 aa)
 
   
  0.954
hrpB5
HrpB5 protein; Flagellar biosynthesis/type III secretory pathway protein (233 aa)
 
   
  0.946
hrcV
HrcV; Type III secretory pathway component EscV (640 aa)
 
   
  0.942
hrpB1
annotation not available (151 aa)
 
     
  0.941
hrcS
annotation not available (86 aa)
 
   
  0.937
hrcQ
HrcQ protein; Type III secretory pathway protein (335 aa)
 
   
  0.934
hrpD5
annotation not available (315 aa)
 
     
  0.923
hrcN
HrpB6 protein; Flagellar biosynthesis/type III secretory pathway ATPase (438 aa)
 
   
  0.873
hpaB
HpaB protein; Pathogenicity-related export of effector proteins to host plants (160 aa)
 
     
  0.872
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
Server load: low (10%) [HD]