STRINGSTRING
hrpB7 protein (Xanthomonas campestris campestris) - STRING interaction network
"hrpB7" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hrpB7annotation not available (169 aa)    
Predicted Functional Partners:
hrpB4
HrpB4 protein; Pathogenicity-related protein (209 aa)
         
  0.933
hrpB5
HrpB5 protein; Flagellar biosynthesis/type III secretory pathway protein (233 aa)
         
  0.917
hrpB2
annotation not available (130 aa)
         
  0.916
hrcJ
Lipoprotein; Type III secretory pathway lipoprotein EscJ (254 aa)
         
  0.914
hrcT
HrpB8 protein; Type III secretory pathway component EscT (276 aa)
         
  0.909
hrcN
HrpB6 protein; Flagellar biosynthesis/type III secretory pathway ATPase (438 aa)
         
  0.893
hrpB1
annotation not available (151 aa)
         
  0.850
hpaP
annotation not available (203 aa)
         
  0.692
hrpD5
annotation not available (315 aa)
         
  0.663
hrcQ
HrcQ protein; Type III secretory pathway protein (335 aa)
         
  0.660
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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