STRINGSTRING
hrpB4 protein (Xanthomonas campestris campestris) - STRING interaction network
"hrpB4" - HrpB4 protein in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hrpB4HrpB4 protein; Pathogenicity-related protein (209 aa)    
Predicted Functional Partners:
hrpB7
annotation not available (169 aa)
         
  0.933
hrcN
HrpB6 protein; Flagellar biosynthesis/type III secretory pathway ATPase (438 aa)
         
  0.917
hrpB5
HrpB5 protein; Flagellar biosynthesis/type III secretory pathway protein (233 aa)
         
  0.916
hrpB2
annotation not available (130 aa)
         
  0.908
hrcJ
Lipoprotein; Type III secretory pathway lipoprotein EscJ (254 aa)
         
  0.893
hrcT
HrpB8 protein; Type III secretory pathway component EscT (276 aa)
         
  0.893
hrpB1
annotation not available (151 aa)
         
  0.824
hrcU
HrcU protein; Type III secretion exporter (357 aa)
         
  0.711
hrcV
HrcV; Type III secretory pathway component EscV (640 aa)
         
  0.709
hpaP
annotation not available (203 aa)
         
  0.689
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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