STRINGSTRING
hrcU protein (Xanthomonas campestris campestris) - STRING interaction network
"hrcU" - HrcU protein in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hrcUHrcU protein; Type III secretion exporter (357 aa)    
Predicted Functional Partners:
hrcV
HrcV; Type III secretory pathway component EscV (640 aa)
   
  0.994
hrcN
HrpB6 protein; Flagellar biosynthesis/type III secretory pathway ATPase (438 aa)
   
  0.975
hrcR
HrcR protein; Type III secretory pathway component EscR (214 aa)
   
  0.974
hrcS
annotation not available (86 aa)
 
   
  0.939
hrcT
HrpB8 protein; Type III secretory pathway component EscT (276 aa)
 
   
  0.934
hrcJ
Lipoprotein; Type III secretory pathway lipoprotein EscJ (254 aa)
 
   
  0.917
hpaP
annotation not available (203 aa)
 
     
  0.905
flgG
Flagellar basal-body rod protein FlgG; Unnamed protein product; Belongs to the flagella basal body rod proteins family (261 aa)
 
 
  0.905
flgJ
Unnamed protein product (395 aa)
   
   
  0.904
hrcQ
HrcQ protein; Type III secretory pathway protein (335 aa)
 
   
  0.904
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
Server load: low (14%) [HD]