STRINGSTRING
hrpE protein (Xanthomonas campestris campestris) - STRING interaction network
"hrpE" - HrpE protein in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hrpEHrpE protein; Hrp pilus (90 aa)    
Predicted Functional Partners:
hpaB
HpaB protein; Pathogenicity-related export of effector proteins to host plants (160 aa)
         
  0.819
hrpD6
annotation not available (80 aa)
         
  0.785
hrpD5
annotation not available (315 aa)
         
  0.716
hpaA
annotation not available (271 aa)
         
  0.713
hrcU
HrcU protein; Type III secretion exporter (357 aa)
         
  0.712
hrcV
HrcV; Type III secretory pathway component EscV (640 aa)
         
  0.709
hrcC
HrcC protein; Type III secretion system outer membrane protein (605 aa)
         
  0.659
hpaP
annotation not available (203 aa)
         
  0.656
hrcQ
HrcQ protein; Type III secretory pathway protein (335 aa)
         
  0.621
hrcS
annotation not available (86 aa)
         
  0.620
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
Server load: low (14%) [HD]