STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC1215Transcriptional regulator (208 aa)    
Predicted Functional Partners:
XCC1216
Uncharacterized protein; Predicted dinucleotide-binding enzymes
 
     0.768
fecA2
Outer membrane receptor proteins, mostly Fe transport
  
   
 0.614
xcsK
Type II secretory pathway, component PulK
      
 0.482
ftsX
Cell division protein FtsX; Part of the ABC transporter FtsEX involved in cellular division
      
 0.439
XCC2179
Two-component system sensor protein; Predicted periplasmic ligand-binding sensor domain
      
 0.437
fhuA1
Outer membrane receptor proteins, mostly Fe transport
      
 0.436
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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