STRINGSTRING
CAP52487.1 protein (Xanthomonas campestris campestris) - STRING interaction network
"CAP52487.1" - Predicted transcription factor, homolog of eukaryotic MBF1 in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP52487.1Predicted transcription factor, homolog of eukaryotic MBF1 (128 aa)    
Predicted Functional Partners:
CAP52189.1
Predicted transcriptional regulators (80 aa)
   
          0.746
CAP52488.1
Unknown (377 aa)
 
          0.738
CAP52486.1
annotation not available (286 aa)
              0.591
CAP52485.1
annotation not available (129 aa)
              0.591
XCC4229
annotation not available (623 aa)
   
          0.460
CAP52484.1
annotation not available (166 aa)
              0.453
celS1
Glycoside hydrolase; Belongs to the glycosyl hydrolase 12 (cellulase H) family (271 aa)
   
          0.415
virB6_2
VirB6-like membrane protein; Type IV secretory pathway, VirB6 components (359 aa)
   
          0.413
virB6_1
VirB6-like membrane protein; Type IV secretory pathway, VirB6 components (359 aa)
   
          0.409
xcsL
Type II secretory pathway component PulL (354 aa)
   
          0.408
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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