STRINGSTRING
CAP52488.1 protein (Xanthomonas campestris campestris) - STRING interaction network
"CAP52488.1" - Unknown in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP52488.1Unknown (377 aa)    
Predicted Functional Partners:
CAP52487.1
Predicted transcription factor, homolog of eukaryotic MBF1 (128 aa)
 
          0.738
XCC1168
Hsp90xo protein; Molecular chaperone HSP90 family (624 aa)
   
 
  0.550
htpG
Chaperone protein HtpG; Molecular chaperone. Has ATPase activity (634 aa)
   
 
  0.550
CAP52489.1
Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains (644 aa)
   
          0.545
XCC0239
Uncharacterized protein; FOG- GGDEF domain (347 aa)
     
 
  0.519
CAP52490.1
Serine/threonine protein phosphatase (274 aa)
   
 
      0.502
alaS
Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction- alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain (882 aa)
     
 
  0.497
glnB2
Nitrogen regulatory protein PII; Belongs to the P(II) protein family (112 aa)
       
      0.489
glnB1
Nitrogen regulatory protein PII; Belongs to the P(II) protein family (114 aa)
       
      0.489
XCC2389
Ferredoxin (94 aa)
   
 
  0.485
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
Server load: low (12%) [HD]