STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC1198annotation not available (265 aa)    
Predicted Functional Partners:
XCC1197
Dioxygenases related to 2-nitropropane dioxygenase
  
  
 0.904
XCC1196
Uncharacterized protein conserved in bacteria
  
    0.846
tyrA
Chorismate mutase/prephenate dehydrogenase; Prephenate dehydrogenase
 
  
 0.742
rpsP
Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family
       0.703
hisI
Histidine biosynthesis bifunctional protein HisIE; Phosphoribosyl-AMP cyclohydrolase; In the C-terminal section; belongs to the PRA-PH family
  
  
 0.698
XCC1590
P-protein; Prephenate dehydratase
  
  
 0.652
ilvM
Acetolactate synthase (isozyme II) small (regulatory) subunit
 
  
 0.635
edd
Dihydroxyacid dehydratase/phosphogluconate dehydratase; Belongs to the IlvD/Edd family
 
 
 0.623
ilvC
Ketol-acid reductoisomerase (NADP(+)); Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate; Belongs to the ketol-acid reductoisomerase family
  
 
 0.591
XCC2203
Uncharacterized protein; Glucoamylase and related glycosyl hydrolases
  
 
   0.589
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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