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lamA protein (Xanthomonas campestris campestris) - STRING interaction network
"lamA" - Endo-1,3-beta-glucanase in Xanthomonas campestris campestris
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
lamAEndo-1,3-beta-glucanase; Beta-glucanase/Beta-glucan synthetase (452 aa)    
Predicted Functional Partners:
engXCA
Major extracellular endoglucanase; Endoglucanase (484 aa)
 
   
  0.669
srfJ
O-Glycosyl hydrolase; Belongs to the glycosyl hydrolase 30 family (566 aa)
 
     
  0.642
hrpW
annotation not available (329 aa)
 
   
  0.536
XCC0740
annotation not available (432 aa)
       
  0.531
XCC2387
Endoglucanase; Degradation of cellulose-like polysaccharides (586 aa)
 
   
  0.499
manA
Mannan endo-1,4-beta-mannosidase; Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family (333 aa)
 
     
  0.477
xylB5
Xylosidase; Hydrolyzes 1,4-beta-D-xylans to remove successive D-xylose residues from the non-reducing termini; Belongs to the glycosyl hydrolase 43 family (544 aa)
 
     
  0.469
XCC1189
annotation not available (89 aa)
              0.449
XCC0857
Xylanase; O-Glycosyl hydrolase (405 aa)
 
     
  0.444
XCC0955
Peptidyl-Asp metalloendopeptidase; Metalloprotease, specifically cleaves on the N-terminal side of aspartyl, glutamyl and cysteic acid residues (417 aa)
 
     
  0.434
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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