STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC1179Outer membrane receptor proteins mostly Fe transport (789 aa)    
Predicted Functional Partners:
XCC4235
Outer membrane receptor proteins mostly Fe transport
  
   0.676
fpvA3
Outer membrane receptor proteins mostly Fe transport
  
    0.664
XCC2469
Outer membrane receptor proteins mostly Fe transport
  
  
 0.645
XCC3635
Outer membrane receptor proteins mostly Fe transport
  
    0.625
XCC3036
Outer membrane receptor proteins mostly Fe transport
  
    0.600
XCC3405
Outer membrane receptor proteins mostly Fe transport
 
  
 0.593
XCC2887
Outer membrane receptor proteins mostly Fe transport
  
    0.587
XCC0119
Outer membrane receptor proteins mostly Fe transport
  
    0.583
XCC0946
Outer membrane receptor proteins mostly Fe transport
  
    0.548
XCC2828
Outer membrane receptor proteins mostly Fe transport
  
    0.538
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
Server load: low (8%) [HD]