STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC1174annotation not available (336 aa)    
Predicted Functional Partners:
rsbS
Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
 
 
 0.988
rsbR
Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
 
 
 0.988
rsbT
Sigma-B negative effector; Anti-sigma regulatory factor (Ser/Thr protein kinase)
 
     0.977
XCC1175
Two-component system sensor protein; Signal transduction histidine kinase
 
   
 0.962
XCC1176
Histidine kinase/response regulator hybrid protein; Signal transduction histidine kinase, nitrogen specific; CheY, FOG: CheY-like receiver
 
    0.949
icfG
IcfG protein; Methyl-accepting chemotaxis protein
     
 0.632
fliA
RNA polymerase sigma factor FliA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes
  
 
 0.594
XCC3619
Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); Belongs to the anti-sigma-factor antagonist family
  
 
 0.533
XCC2699
Uncharacterized protein; Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
  
 
 0.533
XCC1887
Uncharacterized protein; Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
  
 
 0.533
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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