STRINGSTRING
rsbT protein (Xanthomonas campestris campestris) - STRING interaction network
"rsbT" - Sigma-B negative effector in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rsbTSigma-B negative effector; Anti-sigma regulatory factor (Ser/Thr protein kinase) (133 aa)    
Predicted Functional Partners:
rsbR
Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) (280 aa)
 
 
  0.996
rsbS
Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) (120 aa)
 
 
  0.988
XCC1175
Two-component system sensor protein; Signal transduction histidine kinase (292 aa)
     
  0.982
XCC1174
annotation not available (336 aa)
 
          0.977
XCC1176
Histidine kinase/response regulator hybrid protein; Signal transduction histidine kinase, nitrogen specific; CheY, FOG- CheY-like receiver (646 aa)
        0.932
icfG
IcfG protein; Methyl-accepting chemotaxis protein (686 aa)
         
  0.632
fliA
RNA polymerase sigma factor FliA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes (255 aa)
   
 
  0.594
ech1
3-hydroxybutyryl-CoA dehydratase; Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family (260 aa)
           
  0.582
XCC1887
Uncharacterized protein; Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) (102 aa)
   
 
  0.533
XCC2699
Uncharacterized protein; Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) (109 aa)
   
 
  0.533
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
Server load: low (13%) [HD]