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ribF protein (Xanthomonas campestris campestris) - STRING interaction network
"ribF" - Riboflavin biosynthesis protein in Xanthomonas campestris campestris
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
ribFRiboflavin biosynthesis protein; FAD synthase; Belongs to the ribF family (362 aa)    
Predicted Functional Partners:
ileS
Isoleucine--tRNA ligase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as ’pretransfer’ editing and involves the hydrolysis of activated Val-AMP. The other activity is designated ’posttransfer’ editing and involves deacylation of mischarged Val-tRNA(Ile); Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily (943 aa)
 
   
  0.980
ribE
Riboflavin synthase alpha chain (200 aa)
 
  0.963
sflA
NADH-dependent FMN reductase; Predicted flavoprotein (197 aa)
       
  0.908
XCC3903
Hydrolase; Predicted hydrolase (HAD superfamily) (243 aa)
   
 
    0.908
phoC
Acid phosphatase; Membrane-associated phospholipid phosphatase (280 aa)
         
    0.900
appA
annotation not available (443 aa)
         
    0.900
ribD
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family (364 aa)
 
   
  0.848
truB
tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs (308 aa)
 
   
  0.816
murJ
Probable lipid II flippase MurJ; Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane (530 aa)
 
        0.815
cmk
Cytidylate kinase; Unnamed protein product; Belongs to the cytidylate kinase family. Type 1 subfamily (226 aa)
        0.813
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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