STRINGSTRING
XCC1146 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC1146" - Uncharacterized protein in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC1146Uncharacterized protein; Dihydroxynaphthoic acid synthase (228 aa)    
Predicted Functional Partners:
fadE3
Acyl-CoA dehydrogenases (382 aa)
 
 
  0.824
fadA2
3-ketoacyl-CoA thiolase; Acetyl-CoA acetyltransferase; Belongs to the thiolase family (401 aa)
 
 
  0.771
fadA3
Acetoacetyl-CoA thiolase; Acetyl-CoA acetyltransferase; Belongs to the thiolase family (391 aa)
 
 
  0.763
gcdH
Acyl-CoA dehydrogenases (387 aa)
 
 
  0.747
fadA1
Acyl-CoA thiolase; Acetyl-CoA acetyltransferase; Belongs to the thiolase family (431 aa)
 
 
  0.737
pcaF
Beta-ketoadipyl CoA thiolase; Acetyl-CoA acetyltransferase; Belongs to the thiolase family (402 aa)
 
 
  0.734
tesB
Acyl-CoA thiolesterase II; Acyl-CoA thioesterase (301 aa)
   
   
  0.708
fadE4
Acyl-CoA dehydrogenases (393 aa)
 
 
  0.687
XCC1144
annotation not available (168 aa)
              0.665
CAP52559.1
annotation not available (82 aa)
              0.665
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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