STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC1142Uncharacterized protein; NADPH-dependent glutamate synthase beta chain and related oxidoreductases (270 aa)    
Predicted Functional Partners:
XCC3798
annotation not available
  
     0.735
ate
Putative arginyl-tRNA--protein transferase; May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate
       0.629
XCC0767
annotation not available
  
     0.626
XCC1130
Uncharacterized small membrane protein
  
     0.624
XCC1140
Uncharacterized protein conserved in bacteria
 
     0.608
XCC3757
annotation not available
  
     0.606
apaH
Bis(5'-nucleosyl)-tetraphosphatase, symmetrical; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
   
 
 0.594
XCC4130
annotation not available
  
     0.589
yjcE
Na+:H+ antiporter; NhaP-type Na+/H+ and K+/H+ antiporters
   
 
 0.570
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP
    
 
 0.568
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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