STRINGSTRING
XCC1140 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC1140" - Uncharacterized protein conserved in bacteria in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC1140Uncharacterized protein conserved in bacteria (406 aa)    
Predicted Functional Partners:
XCC4234
Glycerophosphoryl diester phosphodiesterase (392 aa)
          0.874
XCC0255
Nuclease; Predicted extracellular nuclease (572 aa)
          0.789
ate
Putative arginyl-tRNA--protein transferase; May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate (252 aa)
              0.781
XCC1142
Uncharacterized protein; NADPH-dependent glutamate synthase beta chain and related oxidoreductases (270 aa)
 
          0.608
pldA
Phospholipase; Outer membrane phospholipase A (376 aa)
     
        0.607
kdgR
Transcriptional regulator (249 aa)
     
        0.512
pcaR
Transcriptional regulator; Unnamed protein product (286 aa)
     
        0.512
XCC1139
annotation not available (204 aa)
              0.433
XCC1138
annotation not available (351 aa)
         
  0.400
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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