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XCC1130 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC1130" - Uncharacterized small membrane protein in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC1130Uncharacterized small membrane protein (134 aa)    
Predicted Functional Partners:
XCC1131
3-methyladenine DNA glycosylase (213 aa)
              0.825
XCC3757
annotation not available (246 aa)
   
          0.781
XCC0557
annotation not available (127 aa)
   
          0.777
XCC0767
annotation not available (81 aa)
   
          0.777
XCC0858
annotation not available (114 aa)
   
          0.776
XCC1129
annotation not available (393 aa)
 
          0.774
XCC1427
annotation not available (71 aa)
   
          0.767
XCC0936
annotation not available (215 aa)
   
          0.766
XCC1558
Uncharacterized protein (111 aa)
   
          0.763
XCC4130
annotation not available (324 aa)
   
          0.761
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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