STRINGSTRING
yjdB protein (Xanthomonas campestris campestris) - STRING interaction network
"yjdB" - Inner membrane protein in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yjdBInner membrane protein; Predicted membrane-associated metal-dependent hydrolase (551 aa)    
Predicted Functional Partners:
XCC1118
annotation not available (256 aa)
        0.989
ygiX
Two-component system regulatory protein; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain (221 aa)
   
   
  0.824
XCC1119
Uncharacterized protein; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family (634 aa)
   
   
  0.779
dgkA
Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid (126 aa)
 
   
  0.773
phoP
Two-component system regulatory protein; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain (227 aa)
   
   
  0.648
XCC1116
annotation not available (672 aa)
              0.639
XCC1121
Two-component system sensor protein; Signal transduction histidine kinase (427 aa)
 
 
  0.616
zipA
Cell division protein ZipA; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins (244 aa)
       
      0.567
mdoB
Phosphoglycerol transferase I; Transfers a phosphoglycerol residue from phosphatidylglycerol to the membrane-bound nascent glucan backbones; Belongs to the OpgB family (702 aa)
     
 
  0.506
XCC1120
Two-component system regulatory protein; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain (239 aa)
   
        0.482
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
Server load: low (12%) [HD]