STRINGSTRING
XCC1116 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC1116" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC1116annotation not available (672 aa)    
Predicted Functional Partners:
yjdB
Inner membrane protein; Predicted membrane-associated metal-dependent hydrolase (551 aa)
              0.639
XCC1118
annotation not available (256 aa)
              0.639
XCC1115
annotation not available (643 aa)
              0.531
XCC3961
Dipeptidyl aminopeptidases/acylaminoacyl-peptidases (751 aa)
 
     
  0.504
XCC3157
Predicted aminopeptidases (375 aa)
 
     
  0.475
pgi
Glucose-6-phosphate isomerase (504 aa)
         
  0.463
XCC2741
Bifunctional diaminopimelate decarboxylase/aspartate kinase; Diaminopimelate decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family (896 aa)
         
  0.453
XCC0024
Uncharacterized protein; Predicted aminopeptidases (594 aa)
 
     
  0.445
XCC2632
annotation not available (600 aa)
   
          0.432
rpe
Pentose-5-phosphate-3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family (233 aa)
           
  0.430
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
Server load: low (14%) [HD]