STRINGSTRING
XCC1115 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC1115" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC1115annotation not available (643 aa)    
Predicted Functional Partners:
xcc-b100_1236
Acetyltransferases, including N-acetylases of ribosomal proteins (635 aa)
   
          0.781
XCC3284
annotation not available (315 aa)
   
          0.777
XCC2016
Uncharacterized protein (394 aa)
   
          0.763
XCC0131
annotation not available (223 aa)
   
          0.760
wxcD
wxcD; Glycosyltransferase (581 aa)
   
          0.754
hrpW
annotation not available (329 aa)
   
          0.754
XCC0449
Lytic enzyme; RTX toxins and related Ca2+-binding proteins (576 aa)
   
          0.728
parD
Plasmid stabilization protein; Involved in plasmid partition (84 aa)
   
          0.726
CAP49830.1
Uncharacterized conserved protein (265 aa)
   
          0.722
CAP49462.1
Unknown (90 aa)
   
          0.722
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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