STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC1104annotation not available (342 aa)    
Predicted Functional Partners:
XCC1682
Serine kinase of the HPr protein, regulates carbohydrate metabolism
  
     0.633
appA
annotation not available
  
     0.631
XCC1684
ABC transporter ATP-binding protein; ABC-type multidrug transport system ATPase and permease components
  
     0.624
XCC0253
annotation not available
  
     0.585
XCC1892
Outer membrane receptor proteins mostly Fe transport
  
     0.565
XCC2665
Outer membrane receptor proteins mostly Fe transport
  
     0.559
XCC0155
annotation not available
  
     0.537
XCC1401
annotation not available
  
     0.514
XCC4126
annotation not available
  
     0.511
ccmD
Heme exporter protein D; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
  
     0.509
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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