STRINGSTRING
XCC1086 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC1086" - Uncharacterized protein in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC1086Uncharacterized protein; FOG- EAL domain (248 aa)    
Predicted Functional Partners:
CAP50207.1
FOG- GGDEF domain (169 aa)
 
 
  0.841
XCC3519
GGDEF family protein; FOG- GGDEF domain (326 aa)
 
 
  0.827
XCC3759
GGDEF family protein; FOG- PAS/PAC domain (483 aa)
 
 
  0.797
XCC0239
Uncharacterized protein; FOG- GGDEF domain (347 aa)
 
 
  0.787
XCC3523
Histidine kinase/response regulator hybrid protein; FOG- PAS/PAC domain (865 aa)
 
 
  0.782
XCC3486
Response regulator; FOG- GGDEF domain (296 aa)
 
 
  0.767
XCC1443
Uncharacterized protein; FOG- GGDEF domain (369 aa)
 
 
  0.758
XCC1294
Sensor histidine kinase; FOG- GGDEF domain (578 aa)
 
 
  0.753
XCC2360
Signal transduction histidine kinase (1364 aa)
   
  0.746
CAP52102.1
FOG- GGDEF domain (376 aa)
 
 
  0.737
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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