STRINGSTRING
XCC1085 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC1085" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC1085annotation not available (100 aa)    
Predicted Functional Partners:
XCC1084
Thioredoxin reductase (582 aa)
 
          0.967
yjcE
Na+-H+ antiporter; NhaP-type Na+/H+ and K+/H+ antiporters (545 aa)
 
        0.818
kefB2
Cation-proton antiporter; Kef-type K+ transport system, predicted NAD-binding component; Belongs to the monovalent cation-proton antiporter 2 (CPA2) transporter (TC 2.A.37) family (592 aa)
 
            0.716
kefC
Glutathione-regulated potassium-efflux system protein; Kef-type K+ transport systems membrane components; Belongs to the monovalent cation-proton antiporter 2 (CPA2) transporter (TC 2.A.37) family (603 aa)
 
            0.610
XCC1989
Molybdopterin biosynthesis protein; Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 (378 aa)
     
 
  0.589
XCC1083
annotation not available (257 aa)
              0.530
XCC1216
Uncharacterized protein; Predicted dinucleotide-binding enzymes (244 aa)
   
          0.419
XCC1082
Oxidoreductase; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family (327 aa)
              0.405
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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