STRINGSTRING
XCC1078 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC1078" - Uncharacterized protein in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC1078Uncharacterized protein; Glucoamylase and related glycosyl hydrolases (601 aa)    
Predicted Functional Partners:
XCC1079
Oxidoreductase; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) (300 aa)
 
        0.876
otsB
Trehalose 6-phosphate phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose (252 aa)
   
  0.690
ggpS
Trehalose-6-phosphate synthase (785 aa)
 
     
  0.656
otsA
Trehalose-6-phosphate synthase; Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor; Belongs to the glycosyltransferase 20 family (455 aa)
 
     
  0.645
CAP52631.1
annotation not available (60 aa)
              0.629
XCC1080
Uncharacterized protein (240 aa)
              0.629
glgY
Maltooligosyl trehalose synthase (872 aa)
 
     
  0.504
tspO
Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog) (162 aa)
   
        0.416
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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