STRINGSTRING
uidR protein (Xanthomonas campestris campestris) - STRING interaction network
"uidR" - Transcriptional regulator in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uidRTranscriptional regulator (209 aa)    
Predicted Functional Partners:
hrpD5
annotation not available (315 aa)
   
          0.754
hrpF
HrpF protein; Pathogenicity-related export of effector proteins to host plants (921 aa)
   
          0.751
hrcQ
HrcQ protein; Type III secretory pathway protein (335 aa)
   
          0.749
avrBs2
Avirulence protein; Glycerophosphoryl diester phosphodiesterase,probable (718 aa)
   
          0.749
hrpB1
annotation not available (151 aa)
   
          0.748
hpaP
annotation not available (203 aa)
   
          0.740
XCC3797
annotation not available (144 aa)
   
          0.737
XCC3897
annotation not available (259 aa)
   
          0.731
hrpB5
HrpB5 protein; Flagellar biosynthesis/type III secretory pathway protein (233 aa)
   
          0.729
XCC0049
Uncharacterized protein conserved in bacteria (262 aa)
   
          0.718
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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