STRINGSTRING
CAP52642.1 protein (Xanthomonas campestris campestris) - STRING interaction network
"CAP52642.1" - Type I site-specific restriction-modification system R in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP52642.1Type I site-specific restriction-modification system R (restriction) subunit and related helicases (1027 aa)    
Predicted Functional Partners:
CAP52645.1
Type I restriction-modification system methyltransferase subunit (728 aa)
 
   
  0.989
CAP52643.1
Restriction endonuclease S subunits (438 aa)
 
   
  0.976
hsdM
Type I restriction-modification system methyltransferase subunit (502 aa)
 
   
  0.932
CAP52644.1
Virulence protein (360 aa)
 
          0.927
CAP52646.1
Restriction endonuclease (296 aa)
 
          0.849
hsdS
Type I restriction enzyme (Specificity chain) homolog; Restriction endonuclease S subunits (415 aa)
 
   
  0.836
CAP51796.1
Chromosome segregation ATPases (595 aa)
   
        0.682
XCC2901
annotation not available (198 aa)
 
   
  0.662
XCC0525
ATP-dependent DNA helicase; Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen (438 aa)
 
        0.643
XCC2906
Uncharacterized protein; Predicted metal-dependent hydrolase (248 aa)
 
     
  0.579
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
Server load: low (21%) [HD]