STRINGSTRING
XCC1066 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC1066" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC1066annotation not available (100 aa)    
Predicted Functional Partners:
XCC1065
annotation not available (87 aa)
 
 
 
  0.978
XCC1064
annotation not available (228 aa)
 
          0.726
CAP52646.1
Restriction endonuclease (296 aa)
              0.694
XCC1063
annotation not available (176 aa)
 
          0.669
XCC1034
Uncharacterized protein (110 aa)
 
 
 
  0.638
CAP52644.1
Virulence protein (360 aa)
 
          0.620
CAP52645.1
Type I restriction-modification system methyltransferase subunit (728 aa)
              0.528
CAP52643.1
Restriction endonuclease S subunits (438 aa)
              0.520
CAP52642.1
Type I site-specific restriction-modification system R (restriction) subunit and related helicases (1027 aa)
              0.520
XCC0572
annotation not available (384 aa)
   
          0.457
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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