STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC1066annotation not available (100 aa)    
Predicted Functional Partners:
XCC1065
annotation not available
 
 
 
 0.978
XCC1064
annotation not available
 
     0.726
CAP52646.1
Restriction endonuclease
       0.694
XCC1063
annotation not available
 
     0.669
XCC1034
Uncharacterized protein
 
 
 
 0.638
CAP52644.1
Virulence protein
 
     0.620
CAP52645.1
Type I restriction-modification system methyltransferase subunit
       0.528
CAP52642.1
Type I site-specific restriction-modification system R (restriction) subunit and related helicases
       0.520
CAP52643.1
Restriction endonuclease S subunits
       0.520
XCC0572
annotation not available
  
     0.457
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
Server load: low (5%) [ZH]